A0A1V6U2Q7 protein (Penicillium flavigenum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1V6U2Q7

Uncharacterized protein. (675 aa)

Predicted Functional Partners:

A0A1V6T8K6

0.704

A0A1V6RZW2

0.680

A0A1V6S066

0.680

A0A1V6S1W4

0.680

A0A1V6S787

0.680

A0A1V6S8V0

0.680

A0A1V6SC12

0.680

A0A1V6TY02

0.652

A0A1V6U3G5

0.637

A0A1V6TF51

0.630

Your Current Organism:

Penicillium flavigenum

NCBI taxonomy Id: 254877
Other names: CBS 419.89, IBT 21526, IBT 3091, IBT V1035, IMI 293207, P. flavigenum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6RZW2	A0A1V6S066	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.817
A0A1V6RZW2	A0A1V6S1W4	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.712
A0A1V6RZW2	A0A1V6S787	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.713
A0A1V6RZW2	A0A1V6S8V0	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.713
A0A1V6RZW2	A0A1V6SC12	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.709
A0A1V6RZW2	A0A1V6T8K6	ANK_REP_REGION domain-containing protein.	Serine/threonine-protein phosphatase.	0.799
A0A1V6RZW2	A0A1V6TY02	ANK_REP_REGION domain-containing protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.719
A0A1V6RZW2	A0A1V6U2Q7	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.680
A0A1V6RZW2	A0A1V6U3G5	ANK_REP_REGION domain-containing protein.	Fungal_trans domain-containing protein.	0.680
A0A1V6S066	A0A1V6RZW2	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.817
A0A1V6S066	A0A1V6S1W4	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.821
A0A1V6S066	A0A1V6S787	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.821
A0A1V6S066	A0A1V6S8V0	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.821
A0A1V6S066	A0A1V6SC12	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.713
A0A1V6S066	A0A1V6T8K6	ANK_REP_REGION domain-containing protein.	Serine/threonine-protein phosphatase.	0.799
A0A1V6S066	A0A1V6TY02	ANK_REP_REGION domain-containing protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.719
A0A1V6S066	A0A1V6U2Q7	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.680
A0A1V6S066	A0A1V6U3G5	ANK_REP_REGION domain-containing protein.	Fungal_trans domain-containing protein.	0.680
A0A1V6S1W4	A0A1V6RZW2	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.712
A0A1V6S1W4	A0A1V6S066	ANK_REP_REGION domain-containing protein.	ANK_REP_REGION domain-containing protein.	0.821