STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR80225.1Nicotinate dehydrogenase subunit A. (156 aa)    
Predicted Functional Partners:
SDS80065.1
CO or xanthine dehydrogenase, Mo-binding subunit.
 
  0.986
SDT51797.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
  0.974
SDR80173.1
CO or xanthine dehydrogenase, Mo-binding subunit.
 0.968
SDT50177.1
Xanthine dehydrogenase YagR molybdenum-binding subunit.
 
  0.945
SDT03653.1
Carbon-monoxide dehydrogenase large subunit.
 
 
  0.940
SDT11656.1
Carbon-monoxide dehydrogenase large subunit.
 
  0.923
SDT54067.1
Carbon-monoxide dehydrogenase large subunit.
 
  0.918
SDT57746.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; Manually curated.
 
  0.879
SDT58780.1
Carbon-monoxide dehydrogenase large subunit.
 
  0.872
SDS68925.1
Carbon-monoxide dehydrogenase large subunit.
 
  0.871
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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