STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR93528.1Tripartite-type tricarboxylate transporter, receptor component TctC. (325 aa)    
Predicted Functional Partners:
SDS47000.1
TctA family transporter.
  
    0.845
SDS69748.1
TctA family transporter.
  
    0.845
SDT11455.1
TctA family transporter.
  
    0.845
SDT56151.1
Putative tricarboxylic transport membrane protein.
  
    0.842
SDR80938.1
TctA family transporter.
  
    0.838
SDT11478.1
Tripartite tricarboxylate transporter TctB family protein.
 
    0.756
SDS69731.1
Tripartite tricarboxylate transporter TctB family protein.
 
    0.726
SDS46974.1
Tripartite tricarboxylate transporter TctB family protein.
 
    0.679
SDR93495.1
Threonine dehydrogenase.
       0.505
SDR93469.1
Ribonuclease Z.
       0.413
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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