STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS04122.1Phasin family protein. (102 aa)    
Predicted Functional Partners:
SDT44027.1
Phasin.
  
   
 0.794
SDT29798.1
Hypothetical protein.
  
     0.732
SDT07390.1
Hypoxia induced protein conserved region.
  
     0.720
SDS26632.1
Outer membrane immunogenic protein.
  
     0.697
SDT49185.1
Opacity protein.
  
     0.685
SDT52826.1
Predicted protein tyrosine phosphatase.
  
     0.675
SDS75476.1
Protein of unknown function.
  
     0.626
SDS35793.1
Outer membrane immunogenic protein.
  
     0.618
SDS76195.1
Protein of unknown function.
  
     0.618
SDT48195.1
Outer membrane immunogenic protein.
  
     0.600
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.