STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS04326.1MFS transporter, DHA2 family, multidrug resistance protein. (473 aa)    
Predicted Functional Partners:
SDT29164.1
MFS transporter, DHA2 family, multidrug resistance protein.
  
     0.700
SDS75657.1
Major Facilitator Superfamily protein.
  
     0.664
SDT54980.1
Membrane fusion protein, multidrug efflux system.
 
   0.646
SDT29145.1
Membrane fusion protein, multidrug efflux system.
 
   0.627
SDT45502.1
Multidrug resistance efflux pump.
 
   0.627
SDS57071.1
Membrane fusion protein, multidrug efflux system.
 
   0.625
SDT14082.1
Membrane fusion protein, multidrug efflux system.
 
   0.621
SDS89340.1
Membrane fusion protein, multidrug efflux system.
 
   0.595
SDT32976.1
Membrane fusion protein, multidrug efflux system.
 
   0.584
SDS78425.1
Membrane fusion protein, multidrug efflux system.
 
   0.579
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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