STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS09281.1Arylsulfatase. (826 aa)    
Predicted Functional Partners:
SDS40773.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
 
   0.856
SDS41934.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
 
   0.855
SDS09348.1
Uncharacterized conserved protein.
 
     0.851
SDS09312.1
Uncharacterized conserved protein.
 
     0.844
SDT00825.1
Uncharacterized protein.
 
 
 0.835
SDS41845.1
Phosphoserine phosphatase.
 
     0.754
SDS84693.1
Haloacid dehalogenase-like hydrolase.
 
     0.754
SDS86047.1
Uncharacterized conserved protein.
 
     0.740
SDS41800.1
Uncharacterized conserved protein.
 
     0.693
SDS57280.1
Opacity protein.
 
     0.688
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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