STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS17326.1BrnA antitoxin of type II toxin-antitoxin system. (79 aa)    
Predicted Functional Partners:
SDS17310.1
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
       0.800
SDT06828.1
Hypothetical protein.
  
     0.625
SDT48252.1
Hypothetical protein.
  
     0.603
SDS17997.1
Hypothetical protein.
  
     0.596
SDS44111.1
Hypothetical protein.
  
     0.570
SDS42237.1
Acyl carrier protein.
  
   
 0.558
SDS59020.1
Uncharacterized membrane protein.
  
     0.556
SDT02108.1
Hypothetical protein.
  
     0.516
SDS33848.1
Outer membrane immunogenic protein.
  
     0.515
SDT27011.1
Uncharacterized conserved protein.
  
     0.512
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.