STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS40239.1Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family. (239 aa)    
Predicted Functional Partners:
SDS40338.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
  0.961
SDS40374.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.955
SDS47779.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family.
 
 0.946
SDS67136.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family.
 
 0.919
SDS40315.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
 
 
0.890
SDT46386.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family.
 
 
  0.861
SDS56082.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family.
 
 
  0.858
SDS50495.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family.
 
 
  0.855
SDS49511.1
Branched-chain amino acid transport system permease protein/neutral amino acid transport system permease protein.
 
  0.850
SDT56239.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family.
 
 
  0.842
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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