STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS41068.1Crotonobetainyl-CoA:carnitine CoA-transferase CaiB. (397 aa)    
Predicted Functional Partners:
SDS41205.1
NADPH2:quinone reductase.
    
  0.804
SDS41221.1
Crotonobetainyl-CoA:carnitine CoA-transferase CaiB.
 
    
0.801
SDS41088.1
Branched-chain amino acid transport system substrate-binding protein.
       0.773
SDS41162.1
enoyl-CoA hydratase.
       0.773
SDS40959.1
Enoyl-CoA hydratase/carnithine racemase.
       0.543
SDS40991.1
Hypothetical protein.
       0.543
SDS41020.1
Transcriptional regulator, TetR family.
       0.543
SDS59650.1
Heterodimeric methylmalonyl-CoA mutase small subunit.
    
 0.532
SDS59711.1
Heterodimeric methylmalonyl-CoA mutase large subunit precursor.
    
 0.532
SDT58799.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
   
 0.527
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.