STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS48134.1DNA-binding transcriptional regulator, LysR family. (314 aa)    
Predicted Functional Partners:
SDS63557.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.654
SDT30623.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.651
SDS93409.1
LysR family transcriptional regulator, regulator of gene expression of beta-lactamase.
  
     0.611
SDS56657.1
Transcriptional regulator, LysR family.
  
     0.605
SDS81603.1
DNA-binding transcriptional regulator, LysR family.
  
     0.565
SDS10808.1
Transcriptional regulator, LysR family.
  
     0.547
SDS23911.1
Transcriptional regulator, LysR family.
  
     0.439
SDT48915.1
LysR family transcriptional regulator, glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.412
SDT10048.1
Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.
  
     0.409
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.