STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS48268.1Rieske [2Fe-2S] domain-containing protein. (462 aa)    
Predicted Functional Partners:
SDS51044.1
Anthranilate 1,2-dioxygenase small subunit.
 
 0.955
SDT59256.1
Terephthalate 1,2-dioxygenase, beta subunit.
 
 0.955
SDS48166.1
Vanillate O-demethylase ferredoxin subunit.
 
 
 0.870
SDS48243.1
Reactive intermediate/imine deaminase.
  
    0.785
SDS48301.1
NitT/TauT family transport system permease protein.
  
    0.701
SDS48330.1
NitT/TauT family transport system ATP-binding protein.
       0.693
SDS48352.1
NitT/TauT family transport system substrate-binding protein.
       0.693
SDR97687.1
N-methylglutamate dehydrogenase subunit C.
  
 
 0.677
SDS47449.1
Ferredoxin-NADP reductase.
 
 
 0.673
SDT46587.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
 
 0.661
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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