Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR85702.1 | SDS52835.1 | SAMN05444158_0213 | SAMN05444158_2332 | Rod binding protein. | CHAD domain-containing protein. | 0.539 |
SDR85702.1 | SDT49757.1 | SAMN05444158_0213 | SAMN05444158_6503 | Rod binding protein. | Flagellar hook-length control protein FliK. | 0.966 |
SDR85702.1 | fliH | SAMN05444158_0213 | SAMN05444158_6498 | Rod binding protein. | Flagellar assembly protein FliH. | 0.979 |
SDS06702.1 | SDS52835.1 | SAMN05444158_0896 | SAMN05444158_2332 | GTP pyrophosphokinase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | CHAD domain-containing protein. | 0.477 |
SDS06702.1 | SDT55316.1 | SAMN05444158_0896 | SAMN05444158_6975 | GTP pyrophosphokinase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. | 0.907 |
SDS06702.1 | ndk | SAMN05444158_0896 | SAMN05444158_1765 | GTP pyrophosphokinase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.917 |
SDS52795.1 | SDS52835.1 | SAMN05444158_2331 | SAMN05444158_2332 | Universal stress protein family protein. | CHAD domain-containing protein. | 0.559 |
SDS52795.1 | SDS52871.1 | SAMN05444158_2331 | SAMN05444158_2333 | Universal stress protein family protein. | Hypothetical protein. | 0.675 |
SDS52795.1 | SDS52914.1 | SAMN05444158_2331 | SAMN05444158_2334 | Universal stress protein family protein. | Alcohol dehydrogenase, propanol-preferring. | 0.648 |
SDS52835.1 | SDR85702.1 | SAMN05444158_2332 | SAMN05444158_0213 | CHAD domain-containing protein. | Rod binding protein. | 0.539 |
SDS52835.1 | SDS06702.1 | SAMN05444158_2332 | SAMN05444158_0896 | CHAD domain-containing protein. | GTP pyrophosphokinase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.477 |
SDS52835.1 | SDS52795.1 | SAMN05444158_2332 | SAMN05444158_2331 | CHAD domain-containing protein. | Universal stress protein family protein. | 0.559 |
SDS52835.1 | SDS52871.1 | SAMN05444158_2332 | SAMN05444158_2333 | CHAD domain-containing protein. | Hypothetical protein. | 0.794 |
SDS52835.1 | SDS52914.1 | SAMN05444158_2332 | SAMN05444158_2334 | CHAD domain-containing protein. | Alcohol dehydrogenase, propanol-preferring. | 0.773 |
SDS52835.1 | SDS52931.1 | SAMN05444158_2332 | SAMN05444158_2335 | CHAD domain-containing protein. | Hypothetical protein. | 0.484 |
SDS52835.1 | SDT49757.1 | SAMN05444158_2332 | SAMN05444158_6503 | CHAD domain-containing protein. | Flagellar hook-length control protein FliK. | 0.481 |
SDS52835.1 | SDT55316.1 | SAMN05444158_2332 | SAMN05444158_6975 | CHAD domain-containing protein. | GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. | 0.603 |
SDS52835.1 | fliH | SAMN05444158_2332 | SAMN05444158_6498 | CHAD domain-containing protein. | Flagellar assembly protein FliH. | 0.488 |
SDS52835.1 | ndk | SAMN05444158_2332 | SAMN05444158_1765 | CHAD domain-containing protein. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.483 |
SDS52871.1 | SDS52795.1 | SAMN05444158_2333 | SAMN05444158_2331 | Hypothetical protein. | Universal stress protein family protein. | 0.675 |
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