Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR85889.1 | SDR89808.1 | SAMN05444158_0220 | SAMN05444158_0348 | 2-oxo-3-hexenedioate decarboxylase/2-keto-4-pentenoate hydratase. | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | 0.827 |
SDR85889.1 | SDS61840.1 | SAMN05444158_0220 | SAMN05444158_2623 | 2-oxo-3-hexenedioate decarboxylase/2-keto-4-pentenoate hydratase. | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | 0.807 |
SDR85889.1 | SDS62078.1 | SAMN05444158_0220 | SAMN05444158_2630 | 2-oxo-3-hexenedioate decarboxylase/2-keto-4-pentenoate hydratase. | 2-oxohept-3-enedioate hydratase. | 0.506 |
SDR85889.1 | SDS62123.1 | SAMN05444158_0220 | SAMN05444158_2631 | 2-oxo-3-hexenedioate decarboxylase/2-keto-4-pentenoate hydratase. | 5-carboxymethyl-2-hydroxymuconate isomerase. | 0.843 |
SDR85889.1 | SDT57415.1 | SAMN05444158_0220 | SAMN05444158_7160 | 2-oxo-3-hexenedioate decarboxylase/2-keto-4-pentenoate hydratase. | 2-oxohept-3-enedioate hydratase. | 0.514 |
SDR89808.1 | SDR85889.1 | SAMN05444158_0348 | SAMN05444158_0220 | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | 2-oxo-3-hexenedioate decarboxylase/2-keto-4-pentenoate hydratase. | 0.827 |
SDR89808.1 | SDS61816.1 | SAMN05444158_0348 | SAMN05444158_2622 | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | Altronate hydrolase. | 0.667 |
SDR89808.1 | SDS61840.1 | SAMN05444158_0348 | SAMN05444158_2623 | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | 0.902 |
SDR89808.1 | SDS62078.1 | SAMN05444158_0348 | SAMN05444158_2630 | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | 2-oxohept-3-enedioate hydratase. | 0.972 |
SDR89808.1 | SDS62123.1 | SAMN05444158_0348 | SAMN05444158_2631 | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | 5-carboxymethyl-2-hydroxymuconate isomerase. | 0.787 |
SDR89808.1 | SDS83008.1 | SAMN05444158_0348 | SAMN05444158_3371 | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase. | 0.878 |
SDR89808.1 | SDS83724.1 | SAMN05444158_0348 | SAMN05444158_3397 | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | 2-oxo-3-hexenedioate decarboxylase/2-keto-4-pentenoate hydratase. | 0.808 |
SDR89808.1 | SDT13215.1 | SAMN05444158_0348 | SAMN05444158_4508 | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase. | 0.845 |
SDR89808.1 | SDT57415.1 | SAMN05444158_0348 | SAMN05444158_7160 | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | 2-oxohept-3-enedioate hydratase. | 0.972 |
SDR89808.1 | gabD | SAMN05444158_0348 | SAMN05444158_5358 | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.879 |
SDS61816.1 | SDR89808.1 | SAMN05444158_2622 | SAMN05444158_0348 | Altronate hydrolase. | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | 0.667 |
SDS61816.1 | SDS61840.1 | SAMN05444158_2622 | SAMN05444158_2623 | Altronate hydrolase. | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | 0.840 |
SDS61840.1 | SDR85889.1 | SAMN05444158_2623 | SAMN05444158_0220 | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | 2-oxo-3-hexenedioate decarboxylase/2-keto-4-pentenoate hydratase. | 0.807 |
SDS61840.1 | SDR89808.1 | SAMN05444158_2623 | SAMN05444158_0348 | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | 0.902 |
SDS61840.1 | SDS61816.1 | SAMN05444158_2623 | SAMN05444158_2622 | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | Altronate hydrolase. | 0.840 |
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