STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS66381.1Helix-turn-helix. (131 aa)    
Predicted Functional Partners:
SDT52049.1
Hypothetical protein.
  
     0.706
SDT12699.1
Hypothetical protein.
  
     0.697
SDT52055.1
N-terminal double-transmembrane domain-containing protein.
  
     0.684
recO
DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
    0.629
SDT28004.1
DNA polymerase III, delta subunit.
  
     0.611
nadK
NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
  
  
  0.608
SDT52062.1
Protein of unknown function DUF58.
  
     0.608
SDT33587.1
Methyltransferase domain-containing protein.
  
     0.573
SDT48071.1
HAD-superfamily class IIA hydrolase, TIGR01459.
  
     0.554
SDT30919.1
Hypothetical protein.
 
     0.540
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.