STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS73237.1ABC-2 type transport system ATP-binding protein. (260 aa)    
Predicted Functional Partners:
SDS73275.1
ABC-2 type transport system permease protein.
 
 
 0.978
SDT57169.1
Cu-processing system permease protein.
  
 0.905
SDT61240.1
ABC-2 type transport system permease protein.
  
 0.905
SDS73722.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
  0.821
SDS73685.1
PQQ-dependent catabolism-associated beta-propeller protein.
 
    0.804
SDS73449.1
NitT/TauT family transport system substrate-binding protein.
  
 
  0.798
SDS73170.1
Hypothetical protein.
 
     0.784
SDS73033.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
  
  
  0.766
SDS73150.1
Sulfur-oxidizing protein SoxY.
  
  
  0.766
SDS53915.1
PQQ-dependent dehydrogenase, methanol/ethanol family.
  
    0.747
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.