STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS73295.1Outer membrane receptor proteins, mostly Fe transport. (805 aa)    
Predicted Functional Partners:
SDS03704.1
Hypothetical protein.
   
 
 0.877
SDS31297.1
MbeD/MobD like protein.
   
 
 0.877
SDS39893.1
Outer membrane transport energization protein TonB.
   
 
 0.877
SDS60536.1
Hypothetical protein.
   
 
 0.877
SDT42908.1
Cell division and transport-associated protein TolA.
   
 
 0.877
tolB
TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
    
 
 0.877
SDT55735.1
Hypothetical protein.
   
 
 0.877
SDS03950.1
Chromosome partitioning protein.
    
 
 0.872
SDT28034.1
Chromosome segregation ATPase.
    
 
 0.872
SDT44236.1
Chromosome partitioning protein.
    
 
 0.872
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.