STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT04976.1D-amino acid dehydrogenase small subunit. (417 aa)    
Predicted Functional Partners:
SDR97687.1
N-methylglutamate dehydrogenase subunit C.
  
 0.981
SDS49819.1
D-amino-acid dehydrogenase.
  
  
 
0.906
SDS64765.1
D-amino-acid dehydrogenase.
  
  
 
0.901
SDT22054.1
4-hydroxyphenylpyruvate dioxygenase.
   
 
 0.884
SDS94913.1
D-alanine aminotransferase apoenzyme.
     
 0.881
SDR97673.1
N-methylglutamate dehydrogenase subunit B.
  
 0.877
hisC
Histidinol phosphate aminotransferase apoenzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
     
 0.875
SDT49045.1
Aspartate aminotransferase.
     
 0.875
gcvT
Aminomethyltransferase.
  
 0.825
SDR97730.1
N-methylglutamate dehydrogenase subunit D.
  
 0.800
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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