STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT07026.1TIGR02302 family protein. (854 aa)    
Predicted Functional Partners:
tolB
TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.900
SDS15578.1
beta-N-acetylhexosaminidase.
 
  
 0.816
SDT52062.1
Protein of unknown function DUF58.
  
   
 0.787
SDT52049.1
Hypothetical protein.
  
     0.774
SDT52055.1
N-terminal double-transmembrane domain-containing protein.
  
    0.774
SDS39921.1
Outer membrane transport energization protein ExbD.
  
 
 0.768
SDT42890.1
Cell division and transport-associated protein TolR.
  
 
 0.768
SDS04739.1
Protein of unknown function.
  
     0.751
SDT52608.1
Putative signal transducing protein.
 
     0.703
SDT31048.1
Transcriptional regulator, XRE family.
  
   
 0.702
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.