STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT13507.1Putative Ig domain-containing protein. (1366 aa)    
Predicted Functional Partners:
SDS59447.1
Protein of unknown function.
  
 
 
 0.914
SDT27821.1
DNA translocase FtsK.
    
 
 0.882
SDT52023.1
Outer membrane receptor proteins, mostly Fe transport.
    
 
 0.875
SDS55817.1
Unsaturated chondroitin disaccharide hydrolase.
    
 
 0.870
SDT38284.1
FecR family protein.
 
 
 0.870
SDS99993.1
Hypothetical protein.
    
 0.844
SDT21402.1
Subtilase family protein.
 
 0.834
SDS59948.1
Subtilase family protein.
  
 0.799
SDT37409.1
Subtilase family protein.
  
 0.799
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.700
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.