STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT20852.1Phospholipase C. (695 aa)    
Predicted Functional Partners:
SDT55931.1
Ketosteroid isomerase-related protein.
  
     0.729
SDT20900.1
Imelysin.
 
     0.676
SDT20880.1
Cytochrome c peroxidase.
 
     0.663
SDS60912.1
3',5'-cyclic AMP phosphodiesterase CpdA.
  
     0.609
SDT32125.1
Phospholipase C.
  
  
 
0.595
SDS12564.1
Iron complex outermembrane recepter protein.
  
   
 0.583
SDT20826.1
Hypothetical protein.
       0.513
SDS75347.1
Hypothetical protein.
  
     0.496
SDT32139.1
Cytochrome c peroxidase.
 
     0.496
SDS94635.1
Protein of unknown function.
  
     0.458
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.