STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT21994.1Xanthine dehydrogenase, molybdenum binding subunit apoprotein. (781 aa)    
Predicted Functional Partners:
SDT22018.1
Carbon-monoxide dehydrogenase medium subunit.
 
 0.974
SDT21984.1
Carbon-monoxide dehydrogenase small subunit.
 0.972
SDS98040.1
Xanthine dehydrogenase YagT iron-sulfur-binding subunit.
 
 0.971
SDT48468.1
Carbon monoxide dehydrogenase, small subunit.
 0.945
SDR90782.1
Carbon-monoxide dehydrogenase small subunit.
 0.924
SDS79993.1
Carbon-monoxide dehydrogenase small subunit.
 
 0.914
SDT54051.1
Carbon-monoxide dehydrogenase small subunit.
 
  0.905
SDT53748.1
Carbon-monoxide dehydrogenase small subunit.
 0.899
SDR90820.1
Carbon-monoxide dehydrogenase medium subunit.
 
  0.895
SDS71354.1
Carbon-monoxide dehydrogenase small subunit.
 
  0.894
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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