STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT22197.13-(3-hydroxy-phenyl)propionate hydroxylase. (538 aa)    
Predicted Functional Partners:
SDT22175.1
Protein of unknown function.
 
    0.950
SDT22160.1
Glyoxylase, beta-lactamase superfamily II.
 
    0.940
hmgA
Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
 
  
 0.907
SDT22210.1
DNA-binding transcriptional regulator, MarR family.
 
    0.801
SDT58799.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 0.615
SDT22114.1
Fumarylacetoacetate hydrolase.
 
    0.603
SDT22054.1
4-hydroxyphenylpyruvate dioxygenase.
 
 
 0.573
SDT46587.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
 
 0.552
SDS48166.1
Vanillate O-demethylase ferredoxin subunit.
  
  
 0.549
SDS77796.1
Cyclopropane-fatty-acyl-phospholipid synthase.
   
 0.531
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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