STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT32425.1Limonene 1,2-monooxygenase. (413 aa)    
Predicted Functional Partners:
SDT53783.1
Probable F420-dependent oxidoreductase, Rv2161c family.
  
  
  0.726
SDT19370.1
N-acyl-D-aspartate/D-glutamate deacylase.
  
     0.618
SDS66082.1
Threonine dehydrogenase.
  
     0.599
SDT57703.1
FMN reductase.
  
 0.557
SDT37545.1
Rhodanese-like domain-containing protein.
  
 
  0.519
SDT46587.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
 
 0.488
SDT59277.1
CDP-4-dehydro-6-deoxyglucose reductase/3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
  
 
 0.488
SDS20845.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
     0.465
SDT01186.1
Hypothetical protein.
   
 
  0.464
SDS21011.1
Acyl-CoA dehydrogenase.
  
     0.459
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.