STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT35274.1NitT/TauT family transport system substrate-binding protein. (343 aa)    
Predicted Functional Partners:
SDT35305.1
NitT/TauT family transport system permease protein.
 
 
  0.953
SDT35290.1
NitT/TauT family transport system ATP-binding protein.
 
 
  0.942
SDS21279.1
Signal transduction histidine kinase.
    
 0.609
SDS69994.1
NitT/TauT family transport system permease protein.
 
 
  0.602
SDS69917.1
NitT/TauT family transport system permease protein/taurine transport system permease protein.
 
 
  0.565
SDS78728.1
Hypothetical protein.
  
     0.563
SDT35253.1
FAD dependent oxidoreductase.
 
     0.545
SDS66174.1
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.522
SDS48432.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
 0.519
SDT32792.1
Sulfonate transport system permease protein.
 
 
  0.508
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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