STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT37563.1Transcriptional regulator, GntR family. (229 aa)    
Predicted Functional Partners:
SDS57397.1
Transcriptional regulator, GntR family.
  
     0.773
SDT37575.1
L-alanine-DL-glutamate epimerase.
  
    0.773
SDT11292.1
Transcriptional regulator, GntR family.
  
  
 0.730
SDT37588.1
Protease I.
       0.471
SDS86339.1
Acetolactate synthase, small subunit.
   
    0.441
SDT48139.1
[LSU ribosomal protein L3P]-glutamine N5-methyltransferase.
    
   0.420
SDT37605.1
L-alanine-DL-glutamate epimerase.
  
    0.402
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.