STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT43134.1Uncharacterized membrane protein. (210 aa)    
Predicted Functional Partners:
SDT43114.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
       0.800
SDR93322.1
Predicted transglutaminase-like cysteine proteinase.
  
     0.769
SDR92551.1
Uncharacterized conserved protein, contains Zn-finger domain.
  
     0.764
SDT59416.1
Predicted transglutaminase-like cysteine proteinase.
  
     0.761
SDT14637.1
Hypothetical protein.
  
     0.760
SDT16310.1
Hypothetical protein.
  
     0.759
SDR94131.1
Hypothetical protein.
  
     0.753
SDT44013.1
Phasin.
  
     0.749
SDT15554.1
Invasion protein IalB, involved in pathogenesis.
  
     0.748
SDT29798.1
Hypothetical protein.
  
     0.748
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.