STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT45023.1Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (280 aa)    
Predicted Functional Partners:
SDT58799.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
   
 0.820
SDT39804.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
  0.686
SDR82881.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
 
     0.681
SDS96815.1
Glutamate synthase (NADH) large subunit.
    
  0.667
SDS91705.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
 
     0.622
SDT11896.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
  0.592
SDS36930.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
  0.589
SDS32273.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
  0.588
SDT58791.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
  0.577
SDT45042.1
Hypothetical protein.
       0.565
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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