STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT50637.1NitT/TauT family transport system ATP-binding protein. (264 aa)    
Predicted Functional Partners:
SDT50629.1
NitT/TauT family transport system permease protein.
 
 
  0.874
SDT50615.1
ABC-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein.
  
 
  0.773
SDS48432.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
  0.735
SDS41356.1
NitT/TauT family transport system permease protein.
 
 
  0.727
SDT58884.1
NitT/TauT family transport system permease protein.
  
 
  0.700
SDS54881.1
NitT/TauT family transport system permease protein.
  
 
  0.694
SDT57318.1
NitT/TauT family transport system permease protein.
 
 
  0.690
SDT53587.1
NitT/TauT family transport system permease protein/sulfonate transport system permease protein.
  
 
  0.683
SDT59105.1
NitT/TauT family transport system permease protein.
  
 
  0.663
SDT23028.1
NitT/TauT family transport system permease protein/sulfonate transport system permease protein.
  
 
  0.662
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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