STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dkgB2,5-diketo-D-gluconate reductase B. (272 aa)    
Predicted Functional Partners:
SDT58799.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 
 0.942
SDT39884.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 0.856
SDS55230.1
L-galactose dehydrogenase/L-glyceraldehyde 3-phosphate reductase.
 
 0.799
SDS64604.1
Cytochrome P450 / NADPH-cytochrome P450 reductase.
   
 
 0.794
SDS20159.1
NAD(P)H-dependent nitrite reductase flavoprotein subunit.
     
 0.776
SDT57202.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
     
 0.776
SDT47332.1
Putative serine protein kinase, PrkA.
   
    0.703
SDT13132.1
Aryl-alcohol dehydrogenase (NADP+).
 
0.702
SDT53599.1
Predicted oxidoreductase.
 
0.700
SDT48977.1
Predicted oxidoreductase.
 
0.699
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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