STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT55791.1Hypothetical protein. (638 aa)    
Predicted Functional Partners:
SDS15602.1
Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.926
SDS21279.1
Signal transduction histidine kinase.
  
 0.917
SDT50647.1
Acetoin utilization deacetylase AcuC.
   
 0.859
SDT55626.1
Acetoin utilization deacetylase AcuC.
   
 0.859
SDS31024.1
Signal transduction histidine kinase.
   
  0.794
SDT55797.1
Hypothetical protein.
       0.789
SDT55813.1
Protein of unknown function.
       0.789
SDT15687.1
PAN domain-containing protein.
    
 
 0.760
SDT20770.1
ATP-dependent DNA helicase RecQ.
  
 
 0.724
SDR91478.1
Protein of unknown function.
  
 
 0.636
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.