STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT58333.1Hypothetical protein. (468 aa)    
Predicted Functional Partners:
SDT58322.1
Lysophospholipase L1.
       0.773
SDT58302.1
Glycosyl transferase 4-like domain-containing protein.
 
   
 0.756
SDT58290.1
Polysaccharide transporter, PST family.
 
   
 0.621
SDT58273.1
Glycosyltransferase involved in cell wall bisynthesis.
 
   
 0.588
SDS19158.1
Exo-beta-1,3-glucanase, GH17 family.
    
  0.544
SDS99993.1
Hypothetical protein.
    
 0.532
SDT58342.1
Predicted hydrolase, HAD superfamily.
 
     0.524
SDS15578.1
beta-N-acetylhexosaminidase.
  
 
 0.515
SDT45799.1
Phosphotransferase enzyme family protein.
  
     0.504
SDT58317.1
Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains.
     
 0.479
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.