STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT59298.1Cyanate permease. (426 aa)    
Predicted Functional Partners:
SDT59874.1
MFS transporter, putative metabolite:H+ symporter.
  
  
  0.787
SDT59305.1
Crotonobetainyl-CoA:carnitine CoA-transferase CaiB.
       0.664
SDT59242.1
Terephthalate 1,2-dioxygenase, alpha subunit.
 
  
  0.648
SDT59256.1
Terephthalate 1,2-dioxygenase, beta subunit.
 
     0.606
SDT00906.1
MFS transporter, ACS family, glucarate transporter.
  
  
  0.559
SDT59277.1
CDP-4-dehydro-6-deoxyglucose reductase/3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
     
 0.558
SDS56443.1
Major Facilitator Superfamily protein.
  
     0.549
SDT59284.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
       0.548
SDT59267.1
4-hydroxythreonine-4-phosphate dehydrogenase.
       0.541
SDT19720.1
Sugar phosphate permease.
  
     0.533
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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