Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDT60047.1 | SDT60056.1 | SAMN05444158_7399 | SAMN05444158_7400 | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Heavy metal efflux pump, CzcA family. | 0.668 |
SDT60047.1 | SDT60071.1 | SAMN05444158_7399 | SAMN05444158_7401 | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Hypothetical protein. | 0.410 |
SDT60047.1 | SDT60086.1 | SAMN05444158_7399 | SAMN05444158_7402 | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Hypothetical protein. | 0.407 |
SDT60047.1 | SDT60099.1 | SAMN05444158_7399 | SAMN05444158_7403 | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. | 0.402 |
SDT60056.1 | SDT60047.1 | SAMN05444158_7400 | SAMN05444158_7399 | Heavy metal efflux pump, CzcA family. | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.668 |
SDT60056.1 | SDT60071.1 | SAMN05444158_7400 | SAMN05444158_7401 | Heavy metal efflux pump, CzcA family. | Hypothetical protein. | 0.464 |
SDT60056.1 | SDT60086.1 | SAMN05444158_7400 | SAMN05444158_7402 | Heavy metal efflux pump, CzcA family. | Hypothetical protein. | 0.461 |
SDT60056.1 | SDT60099.1 | SAMN05444158_7400 | SAMN05444158_7403 | Heavy metal efflux pump, CzcA family. | Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. | 0.732 |
SDT60056.1 | SDT60109.1 | SAMN05444158_7400 | SAMN05444158_7404 | Heavy metal efflux pump, CzcA family. | Multidrug efflux pump. | 0.498 |
SDT60056.1 | SDT60118.1 | SAMN05444158_7400 | SAMN05444158_7405 | Heavy metal efflux pump, CzcA family. | Multidrug efflux pump. | 0.479 |
SDT60056.1 | SDT60127.1 | SAMN05444158_7400 | SAMN05444158_7406 | Heavy metal efflux pump, CzcA family. | Membrane fusion protein, multidrug efflux system. | 0.806 |
SDT60071.1 | SDT60047.1 | SAMN05444158_7401 | SAMN05444158_7399 | Hypothetical protein. | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.410 |
SDT60071.1 | SDT60056.1 | SAMN05444158_7401 | SAMN05444158_7400 | Hypothetical protein. | Heavy metal efflux pump, CzcA family. | 0.464 |
SDT60071.1 | SDT60086.1 | SAMN05444158_7401 | SAMN05444158_7402 | Hypothetical protein. | Hypothetical protein. | 0.768 |
SDT60071.1 | SDT60099.1 | SAMN05444158_7401 | SAMN05444158_7403 | Hypothetical protein. | Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. | 0.756 |
SDT60071.1 | SDT60109.1 | SAMN05444158_7401 | SAMN05444158_7404 | Hypothetical protein. | Multidrug efflux pump. | 0.476 |
SDT60071.1 | SDT60118.1 | SAMN05444158_7401 | SAMN05444158_7405 | Hypothetical protein. | Multidrug efflux pump. | 0.454 |
SDT60071.1 | SDT60127.1 | SAMN05444158_7401 | SAMN05444158_7406 | Hypothetical protein. | Membrane fusion protein, multidrug efflux system. | 0.454 |
SDT60086.1 | SDT60047.1 | SAMN05444158_7402 | SAMN05444158_7399 | Hypothetical protein. | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.407 |
SDT60086.1 | SDT60056.1 | SAMN05444158_7402 | SAMN05444158_7400 | Hypothetical protein. | Heavy metal efflux pump, CzcA family. | 0.461 |
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