STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT60736.1Phasin. (117 aa)    
Predicted Functional Partners:
SDT44027.1
Phasin.
 
   
 0.775
SDS85641.1
Hypothetical protein.
  
     0.747
SDT43626.1
Hypothetical protein.
  
     0.723
SDS65617.1
Sugar or nucleoside kinase, ribokinase family; Belongs to the carbohydrate kinase PfkB family.
  
     0.721
SDT28379.1
Protein of unknown function.
  
     0.689
SDT41016.1
Protein of unknown function.
  
     0.689
SDR84024.1
Hypothetical protein.
  
     0.681
SDS20856.1
LTXXQ motif family protein.
  
     0.670
SDT27982.1
LPS-assembly lipoprotein.
  
     0.665
SDS07527.1
Hypothetical protein.
  
     0.660
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.