STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT60876.1Acyl dehydratase. (172 aa)    
Predicted Functional Partners:
SDT58799.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 0.903
SDT60796.1
Citrate lyase subunit beta / citryl-CoA lyase.
 
 
 0.835
SDT60841.1
Acyl-CoA dehydrogenase.
 
 
  0.821
SDS82591.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.813
SDT25632.1
Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.810
SDT60860.1
Crotonobetainyl-CoA:carnitine CoA-transferase CaiB.
    
  0.772
SDT60870.1
Crotonobetainyl-CoA:carnitine CoA-transferase CaiB.
    
  0.772
SDT20573.1
beta-methylmalyl-CoA/L-malyl-CoA lyase.
 
 
 0.762
SDS98179.1
Catalase.
   
  0.694
SDT49975.1
Catalase.
   
  0.694
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.