STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT61167.1Ubiquinone/menaquinone biosynthesis C-methylase UbiE. (286 aa)    
Predicted Functional Partners:
SDT61178.1
TolB amino-terminal domain-containing protein.
 
  
  0.703
SDT58799.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
   
 0.700
SDT51104.1
Biotin synthase.
  
 
 0.655
SDT61155.1
Pimeloyl-ACP methyl ester carboxylesterase.
    
  0.537
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.534
SDR97687.1
N-methylglutamate dehydrogenase subunit C.
     
 0.530
SDT55553.1
Methyltransferase domain-containing protein.
  
    0.507
SDS37069.1
Predicted dithiol-disulfide oxidoreductase, DUF899 family.
  
     0.493
SDT39884.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.493
SDT47426.1
NADPH-dependent glutamate synthase beta chain.
  
 
 0.487
Your Current Organism:
Bradyrhizobium canariense
NCBI taxonomy Id: 255045
Other names: B. canariense, Bradyrhizobium canariense Vinuesa et al. 2005, Bradyrhizobium sp. BTA-1, LMG 22265, LMG:22265, NBRC 103049, strain BTA-1
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