STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900014995_01615Unannotated protein. (587 aa)    
Predicted Functional Partners:
GCA_900014995_01613
Unannotated protein.
 
 0.984
GCA_900014995_01614
Unannotated protein.
 
 
   0.957
GCA_900014995_01616
Unannotated protein.
 
 
   0.954
GCA_900014995_01314
Unannotated protein.
  
 
 
 0.934
GCA_900014995_01828
Unannotated protein.
 
 0.905
GCA_900014995_01617
Unannotated protein.
 
  
 0.884
GCA_900014995_01619
Unannotated protein.
 
     0.847
GCA_900014995_01620
Unannotated protein.
 
     0.802
GCA_900014995_02999
Unannotated protein.
 
 
   0.791
GCA_900014995_02917
Unannotated protein.
  
     0.771
Your Current Organism:
Pseudoclavibacter helvolus
NCBI taxonomy Id: 255205
Other names: ATCC 13715, CCUG 43303, DSM 20419, IAM 14726, JCM 9491, NBRC 15775, P. helvolus, Pseudoclavibacter helvolus Manaia et al. 2004, Zimmermannella helvola, Zimmermannella helvola Lin et al. 2004
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