STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABE41_008695Group II intron reverse transcriptase/maturase; Frameshifted. (357 aa)    
Predicted Functional Partners:
ANX12084.1
Hypothetical protein.
 
 
 0.824
ANX12079.1
NAD(P)-dependent oxidoreductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.738
ANX11660.1
Hypothetical protein.
   
 
 0.737
ANX12080.1
Hypothetical protein.
 
  
 0.663
ANX12086.1
Hypothetical protein.
 
  
 0.629
ANX12078.1
UDP-N-acetylglucosamine 4,6-dehydratase.
 
  
 0.597
ANX12085.1
Hypothetical protein.
  
  
 0.570
ANX12077.1
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
  
 0.564
ANX12901.1
Hypothetical protein.
  
 
 0.545
ANX12076.1
Glycosyl transferase family 2.
 
     0.521
Your Current Organism:
Fictibacillus arsenicus
NCBI taxonomy Id: 255247
Other names: Bacillus arsenicus, Bacillus arsenicus Shivaji et al. 2005, Bacillus sp. JP44SK14, DSM 15822, F. arsenicus, Fictibacillus arsenicus (Shivaji et al. 2005) Glaeser et al. 2013, JCM 12167, MTCC 4380, strain Con a/3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.