STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANX13278.116S rRNA (cytosine(1402)-N(4))-methyltransferase. (191 aa)    
Predicted Functional Partners:
ANX13277.1
TIGR01212 family radical SAM protein.
    0.987
mraZ
Cell division/cell wall cluster transcriptional repressor MraZ; Belongs to the MraZ family.
  
  
 0.817
ANX10720.1
Hypothetical protein.
 
   0.789
ANX10988.1
Hypothetical protein.
  
   0.761
rpsI
30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.726
rpsP
30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
   
 
 0.716
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
    
 
 0.712
ftsL
Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family.
  
  
 0.693
ANX10712.1
Oxidoreductase.
 
    0.676
ANX11772.1
Cyanophycin synthetase.
  
  
 0.652
Your Current Organism:
Fictibacillus arsenicus
NCBI taxonomy Id: 255247
Other names: Bacillus arsenicus, Bacillus arsenicus Shivaji et al. 2005, Bacillus sp. JP44SK14, DSM 15822, F. arsenicus, Fictibacillus arsenicus (Shivaji et al. 2005) Glaeser et al. 2013, JCM 12167, MTCC 4380, strain Con a/3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.