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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANX13341.1Hypothetical protein. (450 aa)    
Predicted Functional Partners:
ANX13340.1
Hypothetical protein.
       0.785
ANX13339.1
Lactoylglutathione lyase.
       0.752
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.527
ANX14070.1
Hypothetical protein.
 
     0.446
ANX14071.1
Hypothetical protein.
 
   
 0.433
ANX13338.1
Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
  
 0.429
ANX11608.1
AraC family transcriptional regulator.
 
    
0.417
ANX14041.1
AraC family transcriptional regulator.
 
    
0.411
ANX11463.1
AraC family transcriptional regulator.
 
    
0.407
ANX12483.1
5'-3' exonuclease.
     
 0.402
Your Current Organism:
Fictibacillus arsenicus
NCBI taxonomy Id: 255247
Other names: Bacillus arsenicus, Bacillus arsenicus Shivaji et al. 2005, Bacillus sp. JP44SK14, DSM 15822, F. arsenicus, Fictibacillus arsenicus (Shivaji et al. 2005) Glaeser et al. 2013, JCM 12167, MTCC 4380, strain Con a/3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.