STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANX13929.12-hydroxyhepta-2,4-diene-1,7-dioate isomerase. (314 aa)    
Predicted Functional Partners:
ANX13928.1
Hypothetical protein.
      0.875
ANX13127.1
Succinate dehydrogenase flavoprotein subunit.
  
 
  0.827
ANX13126.1
Succinate dehydrogenase iron-sulfur subunit.
  
 
  0.812
ANX11646.1
Hypothetical protein.
      0.807
ANX13128.1
Succinate dehydrogenase.
  
 
  0.806
ANX10867.1
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.805
ANX13927.1
Cupin.
   
 0.793
ANX13930.1
Hypothetical protein.
  
    0.696
ANX13931.1
Hypothetical protein.
       0.653
ANX13926.1
3-hydroxybenzoate 6-hydroxylase.
  
  
 0.646
Your Current Organism:
Fictibacillus arsenicus
NCBI taxonomy Id: 255247
Other names: Bacillus arsenicus, Bacillus arsenicus Shivaji et al. 2005, Bacillus sp. JP44SK14, DSM 15822, F. arsenicus, Fictibacillus arsenicus (Shivaji et al. 2005) Glaeser et al. 2013, JCM 12167, MTCC 4380, strain Con a/3
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