STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fumCUnannotated protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (463 aa)    
Predicted Functional Partners:
Myrod_1505
Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
 
 0.999
mdh
Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 0.985
Myrod_2273
Unannotated protein.
  
 
 0.979
Myrod_0598
Unannotated protein.
 
 0.975
Myrod_1543
Unannotated protein.
 
 0.967
mqo
Unannotated protein.
    
 0.960
Myrod_0597
Unannotated protein.
  
 0.956
Myrod_1542
Unannotated protein.
  
 0.956
Myrod_2494
Unannotated protein.
   
 0.907
Myrod_2149
Unannotated protein.
    
 0.907
Your Current Organism:
Myroides odoratus
NCBI taxonomy Id: 256
Other names: ATCC 4651, CCUG 7321, CIP 103105, DSM 2801, Flavobacterium odoratum, IAM 14199, IFO 14945, JCM 7458, M. odoratus, NBRC 14945, NCTC 11036
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.