Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001549985_00520 | GCA_001549985_00521 | GCA_001549985_00520 | GCA_001549985_00521 | Unannotated protein. | Unannotated protein. | 0.773 |
GCA_001549985_00520 | GCA_001549985_00522 | GCA_001549985_00520 | GCA_001549985_00522 | Unannotated protein. | Unannotated protein. | 0.773 |
GCA_001549985_00521 | GCA_001549985_00520 | GCA_001549985_00521 | GCA_001549985_00520 | Unannotated protein. | Unannotated protein. | 0.773 |
GCA_001549985_00521 | GCA_001549985_00522 | GCA_001549985_00521 | GCA_001549985_00522 | Unannotated protein. | Unannotated protein. | 0.773 |
GCA_001549985_00521 | GCA_001549985_02992 | GCA_001549985_00521 | GCA_001549985_02992 | Unannotated protein. | Unannotated protein. | 0.895 |
GCA_001549985_00521 | Myrod_1241 | GCA_001549985_00521 | GCA_001549985_03178 | Unannotated protein. | Unannotated protein; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.772 |
GCA_001549985_00521 | Myrod_2496 | GCA_001549985_00521 | GCA_001549985_00054 | Unannotated protein. | Unannotated protein; Belongs to the CinA family. | 0.823 |
GCA_001549985_00521 | Myrod_2766 | GCA_001549985_00521 | GCA_001549985_01228 | Unannotated protein. | Unannotated protein. | 0.824 |
GCA_001549985_00521 | adk | GCA_001549985_00521 | GCA_001549985_03179 | Unannotated protein. | Unannotated protein; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.772 |
GCA_001549985_00521 | guaA | GCA_001549985_00521 | GCA_001549985_03269 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.801 |
GCA_001549985_00521 | guaB | GCA_001549985_00521 | GCA_001549985_01593 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.806 |
GCA_001549985_00521 | topA | GCA_001549985_00521 | GCA_001549985_03097 | Unannotated protein. | Unannotated protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.708 |
GCA_001549985_00522 | GCA_001549985_00520 | GCA_001549985_00522 | GCA_001549985_00520 | Unannotated protein. | Unannotated protein. | 0.773 |
GCA_001549985_00522 | GCA_001549985_00521 | GCA_001549985_00522 | GCA_001549985_00521 | Unannotated protein. | Unannotated protein. | 0.773 |
GCA_001549985_02992 | GCA_001549985_00521 | GCA_001549985_02992 | GCA_001549985_00521 | Unannotated protein. | Unannotated protein. | 0.895 |
GCA_001549985_02992 | Myrod_1241 | GCA_001549985_02992 | GCA_001549985_03178 | Unannotated protein. | Unannotated protein; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.704 |
GCA_001549985_02992 | Myrod_2496 | GCA_001549985_02992 | GCA_001549985_00054 | Unannotated protein. | Unannotated protein; Belongs to the CinA family. | 0.546 |
GCA_001549985_02992 | Myrod_2766 | GCA_001549985_02992 | GCA_001549985_01228 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_001549985_02992 | adk | GCA_001549985_02992 | GCA_001549985_03179 | Unannotated protein. | Unannotated protein; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.704 |
GCA_001549985_02992 | guaA | GCA_001549985_02992 | GCA_001549985_03269 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.862 |
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