STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Myrod_3608Unannotated protein. (483 aa)    
Predicted Functional Partners:
Myrod_3607
Unannotated protein; Belongs to the citrate synthase family.
 
 0.996
prpB
Unannotated protein; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.
 
  
 0.983
Myrod_1187
Unannotated protein; Belongs to the citrate synthase family.
 
 
 0.964
Myrod_0758
Unannotated protein.
 
   
 0.911
Myrod_3575
Unannotated protein.
  
 
  0.804
Myrod_3612
Unannotated protein; Belongs to the HIBADH-related family.
  
 
  0.729
Myrod_1969
Unannotated protein; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.721
Myrod_0756
Unannotated protein.
  
 
 0.721
Myrod_3609
Unannotated protein.
    
  0.658
Myrod_3611
Unannotated protein.
  
 
  0.641
Your Current Organism:
Myroides odoratus
NCBI taxonomy Id: 256
Other names: ATCC 4651, CCUG 7321, CIP 103105, DSM 2801, Flavobacterium odoratum, IAM 14199, IFO 14945, JCM 7458, M. odoratus, NBRC 14945, NCTC 11036
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