Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Myrod_0756 | Myrod_0758 | GCA_001549985_01961 | GCA_001549985_01960 | Unannotated protein. | Unannotated protein. | 0.903 |
Myrod_0756 | Myrod_1187 | GCA_001549985_01961 | GCA_001549985_03231 | Unannotated protein. | Unannotated protein; Belongs to the citrate synthase family. | 0.977 |
Myrod_0756 | Myrod_1969 | GCA_001549985_01961 | GCA_001549985_00624 | Unannotated protein. | Unannotated protein; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 0.879 |
Myrod_0756 | Myrod_3575 | GCA_001549985_01961 | GCA_001549985_02004 | Unannotated protein. | Unannotated protein. | 0.744 |
Myrod_0756 | Myrod_3607 | GCA_001549985_01961 | GCA_001549985_00740 | Unannotated protein. | Unannotated protein; Belongs to the citrate synthase family. | 0.977 |
Myrod_0756 | Myrod_3608 | GCA_001549985_01961 | GCA_001549985_00739 | Unannotated protein. | Unannotated protein. | 0.721 |
Myrod_0756 | Myrod_3611 | GCA_001549985_01961 | GCA_001549985_00736 | Unannotated protein. | Unannotated protein. | 0.626 |
Myrod_0756 | prpB | GCA_001549985_01961 | GCA_001549985_00741 | Unannotated protein. | Unannotated protein; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. | 0.553 |
Myrod_0758 | Myrod_0756 | GCA_001549985_01960 | GCA_001549985_01961 | Unannotated protein. | Unannotated protein. | 0.903 |
Myrod_0758 | Myrod_1187 | GCA_001549985_01960 | GCA_001549985_03231 | Unannotated protein. | Unannotated protein; Belongs to the citrate synthase family. | 0.964 |
Myrod_0758 | Myrod_1969 | GCA_001549985_01960 | GCA_001549985_00624 | Unannotated protein. | Unannotated protein; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 0.903 |
Myrod_0758 | Myrod_3607 | GCA_001549985_01960 | GCA_001549985_00740 | Unannotated protein. | Unannotated protein; Belongs to the citrate synthase family. | 0.964 |
Myrod_0758 | Myrod_3608 | GCA_001549985_01960 | GCA_001549985_00739 | Unannotated protein. | Unannotated protein. | 0.911 |
Myrod_0758 | prpB | GCA_001549985_01960 | GCA_001549985_00741 | Unannotated protein. | Unannotated protein; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. | 0.893 |
Myrod_1187 | Myrod_0756 | GCA_001549985_03231 | GCA_001549985_01961 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein. | 0.977 |
Myrod_1187 | Myrod_0758 | GCA_001549985_03231 | GCA_001549985_01960 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein. | 0.964 |
Myrod_1187 | Myrod_1969 | GCA_001549985_03231 | GCA_001549985_00624 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 0.983 |
Myrod_1187 | Myrod_3575 | GCA_001549985_03231 | GCA_001549985_02004 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein. | 0.925 |
Myrod_1187 | Myrod_3608 | GCA_001549985_03231 | GCA_001549985_00739 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein. | 0.964 |
Myrod_1187 | Myrod_3609 | GCA_001549985_03231 | GCA_001549985_00738 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein. | 0.771 |
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