STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Myrod_0557Unannotated protein. (177 aa)    
Predicted Functional Partners:
Myrod_0556
Unannotated protein.
 
     0.767
Myrod_1919
Unannotated protein.
  
     0.758
Myrod_0549
Unannotated protein.
  
     0.755
Myrod_2815
Unannotated protein.
  
     0.730
Myrod_1313
Unannotated protein.
  
     0.687
Myrod_1637
Unannotated protein.
  
     0.678
Myrod_1377
Unannotated protein.
  
     0.644
Myrod_3602
Unannotated protein.
 
     0.642
Myrod_2305
Unannotated protein.
  
     0.596
Myrod_2259
Unannotated protein.
  
     0.593
Your Current Organism:
Myroides odoratus
NCBI taxonomy Id: 256
Other names: ATCC 4651, CCUG 7321, CIP 103105, DSM 2801, Flavobacterium odoratum, IAM 14199, IFO 14945, JCM 7458, M. odoratus, NBRC 14945, NCTC 11036
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