Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Myrod_0192 | Myrod_2995 | GCA_001549985_03333 | GCA_001549985_01617 | Unannotated protein; Belongs to the arginase family. | Unannotated protein. | 0.476 |
Myrod_0916 | Myrod_2995 | GCA_001549985_02887 | GCA_001549985_01617 | Unannotated protein. | Unannotated protein. | 0.499 |
Myrod_0916 | pdxJ | GCA_001549985_02887 | GCA_001549985_00252 | Unannotated protein. | Unannotated protein; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. | 0.499 |
Myrod_1317 | Myrod_2995 | GCA_001549985_03098 | GCA_001549985_01617 | Unannotated protein; Belongs to the arginase family. | Unannotated protein. | 0.476 |
Myrod_1415 | Myrod_2995 | GCA_001549985_01001 | GCA_001549985_01617 | Unannotated protein. | Unannotated protein. | 0.494 |
Myrod_1415 | pdxH | GCA_001549985_01001 | GCA_001549985_01755 | Unannotated protein. | Unannotated protein; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.517 |
Myrod_2389 | Myrod_2995 | GCA_001549985_00157 | GCA_001549985_01617 | Unannotated protein; Belongs to the arginase family. | Unannotated protein. | 0.476 |
Myrod_2712 | Myrod_2995 | GCA_001549985_01168 | GCA_001549985_01617 | Unannotated protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Unannotated protein. | 0.670 |
Myrod_2968 | Myrod_2995 | GCA_001549985_01643 | GCA_001549985_01617 | Unannotated protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Unannotated protein. | 0.621 |
Myrod_2994 | Myrod_2995 | GCA_001549985_01618 | GCA_001549985_01617 | Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family. | Unannotated protein. | 0.586 |
Myrod_2995 | Myrod_0192 | GCA_001549985_01617 | GCA_001549985_03333 | Unannotated protein. | Unannotated protein; Belongs to the arginase family. | 0.476 |
Myrod_2995 | Myrod_0916 | GCA_001549985_01617 | GCA_001549985_02887 | Unannotated protein. | Unannotated protein. | 0.499 |
Myrod_2995 | Myrod_1317 | GCA_001549985_01617 | GCA_001549985_03098 | Unannotated protein. | Unannotated protein; Belongs to the arginase family. | 0.476 |
Myrod_2995 | Myrod_1415 | GCA_001549985_01617 | GCA_001549985_01001 | Unannotated protein. | Unannotated protein. | 0.494 |
Myrod_2995 | Myrod_2389 | GCA_001549985_01617 | GCA_001549985_00157 | Unannotated protein. | Unannotated protein; Belongs to the arginase family. | 0.476 |
Myrod_2995 | Myrod_2712 | GCA_001549985_01617 | GCA_001549985_01168 | Unannotated protein. | Unannotated protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.670 |
Myrod_2995 | Myrod_2968 | GCA_001549985_01617 | GCA_001549985_01643 | Unannotated protein. | Unannotated protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.621 |
Myrod_2995 | Myrod_2994 | GCA_001549985_01617 | GCA_001549985_01618 | Unannotated protein. | Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family. | 0.586 |
Myrod_2995 | pdxH | GCA_001549985_01617 | GCA_001549985_01755 | Unannotated protein. | Unannotated protein; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.912 |
Myrod_2995 | pdxJ | GCA_001549985_01617 | GCA_001549985_00252 | Unannotated protein. | Unannotated protein; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate. | 0.769 |
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