STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001549985_02162Unannotated protein. (2937 aa)    
Predicted Functional Partners:
Myrod_3056
Unannotated protein.
      
0.773
guaA
Unannotated protein; Catalyzes the synthesis of GMP from XMP.
    
  0.727
GCA_001549985_02163
Unannotated protein.
 
 
   0.661
Myrod_2778
Unannotated protein; Belongs to the membrane-bound acyltransferase family.
  
 0.650
Myrod_2777
Unannotated protein.
  
 0.650
Myrod_2776
Unannotated protein.
   
  0.625
Myrod_2310
Unannotated protein.
   
  0.593
Myrod_1292
Unannotated protein.
   
  0.593
Myrod_2696
Unannotated protein.
  
     0.472
Myrod_2496
Unannotated protein; Belongs to the CinA family.
    
  0.436
Your Current Organism:
Myroides odoratus
NCBI taxonomy Id: 256
Other names: ATCC 4651, CCUG 7321, CIP 103105, DSM 2801, Flavobacterium odoratum, IAM 14199, IFO 14945, JCM 7458, M. odoratus, NBRC 14945, NCTC 11036
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