STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Myrod_0501Unannotated protein. (462 aa)    
Predicted Functional Partners:
GCA_001549985_02992
Unannotated protein.
  
 0.947
Myrod_2766
Unannotated protein.
 
 0.911
GCA_001549985_02557
Unannotated protein.
   
 0.889
Myrod_1477
Unannotated protein.
 
 
 0.852
Myrod_1518
Unannotated protein.
 
 
 0.850
Myrod_2248
Unannotated protein.
 
  
 0.842
GCA_001549985_00634
Unannotated protein.
  
0.836
Myrod_0924
Unannotated protein.
  
 0.764
Myrod_1107
Unannotated protein.
  
  
 0.595
GCA_001549985_01685
Unannotated protein.
   
 0.489
Your Current Organism:
Myroides odoratus
NCBI taxonomy Id: 256
Other names: ATCC 4651, CCUG 7321, CIP 103105, DSM 2801, Flavobacterium odoratum, IAM 14199, IFO 14945, JCM 7458, M. odoratus, NBRC 14945, NCTC 11036
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.