STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Myrod_0326Unannotated protein. (145 aa)    
Predicted Functional Partners:
Myrod_1069
Unannotated protein.
 
0.893
Myrod_2275
Unannotated protein.
    
   0.863
Myrod_2184
Unannotated protein.
   
 0.790
Myrod_0871
Unannotated protein.
   
 0.790
dnaK
Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.764
pyrH
Unannotated protein; Catalyzes the reversible phosphorylation of UMP to UDP.
 
 
  
 0.698
frr
Unannotated protein; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
 
    
 0.688
Myrod_2478
Unannotated protein.
 
 
 0.681
Myrod_2155
Unannotated protein.
    
 
 0.680
Myrod_1106
Unannotated protein.
    
 
 0.680
Your Current Organism:
Myroides odoratus
NCBI taxonomy Id: 256
Other names: ATCC 4651, CCUG 7321, CIP 103105, DSM 2801, Flavobacterium odoratum, IAM 14199, IFO 14945, JCM 7458, M. odoratus, NBRC 14945, NCTC 11036
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