Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001549985_02026 | Myrod_3726 | GCA_001549985_02026 | GCA_001549985_02176 | Unannotated protein. | Unannotated protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.924 |
GCA_001549985_02026 | menA | GCA_001549985_02026 | GCA_001549985_02011 | Unannotated protein. | Unannotated protein; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.446 |
GCA_001549985_02026 | menB | GCA_001549985_02026 | GCA_001549985_02777 | Unannotated protein. | Unannotated protein; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | 0.512 |
Myrod_0900 | Myrod_3205 | GCA_001549985_02871 | GCA_001549985_02677 | Unannotated protein. | Unannotated protein. | 0.612 |
Myrod_0900 | Myrod_3206 | GCA_001549985_02871 | GCA_001549985_02678 | Unannotated protein. | Unannotated protein. | 0.815 |
Myrod_0900 | Myrod_3571 | GCA_001549985_02871 | GCA_001549985_02009 | Unannotated protein. | Unannotated protein. | 0.997 |
Myrod_0900 | menA | GCA_001549985_02871 | GCA_001549985_02011 | Unannotated protein. | Unannotated protein; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.813 |
Myrod_0900 | menB | GCA_001549985_02871 | GCA_001549985_02777 | Unannotated protein. | Unannotated protein; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | 0.979 |
Myrod_0900 | menD | GCA_001549985_02871 | GCA_001549985_01769 | Unannotated protein. | Unannotated protein; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.824 |
Myrod_1683 | menB | GCA_001549985_03580 | GCA_001549985_02777 | Unannotated protein. | Unannotated protein; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | 0.508 |
Myrod_3205 | Myrod_0900 | GCA_001549985_02677 | GCA_001549985_02871 | Unannotated protein. | Unannotated protein. | 0.612 |
Myrod_3205 | Myrod_3206 | GCA_001549985_02677 | GCA_001549985_02678 | Unannotated protein. | Unannotated protein. | 0.899 |
Myrod_3205 | Myrod_3571 | GCA_001549985_02677 | GCA_001549985_02009 | Unannotated protein. | Unannotated protein. | 0.419 |
Myrod_3205 | menA | GCA_001549985_02677 | GCA_001549985_02011 | Unannotated protein. | Unannotated protein; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.950 |
Myrod_3205 | menB | GCA_001549985_02677 | GCA_001549985_02777 | Unannotated protein. | Unannotated protein; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | 0.964 |
Myrod_3205 | menD | GCA_001549985_02677 | GCA_001549985_01769 | Unannotated protein. | Unannotated protein; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.713 |
Myrod_3206 | Myrod_0900 | GCA_001549985_02678 | GCA_001549985_02871 | Unannotated protein. | Unannotated protein. | 0.815 |
Myrod_3206 | Myrod_3205 | GCA_001549985_02678 | GCA_001549985_02677 | Unannotated protein. | Unannotated protein. | 0.899 |
Myrod_3206 | Myrod_3571 | GCA_001549985_02678 | GCA_001549985_02009 | Unannotated protein. | Unannotated protein. | 0.837 |
Myrod_3206 | menA | GCA_001549985_02678 | GCA_001549985_02011 | Unannotated protein. | Unannotated protein; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.800 |
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